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PyMOL 2.5.0

PyMOL Full Download Summary

User Rating: 3.0 (22 votes)

  • File size: 470.00 MB
  • Platform: Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64
  • License: Free To Try
  • Price: $99.00
  • Downloads: Total: 6923 | This Month: 57
  • Released: May 10, 2021
  • Publisher: DeLano Scientific LLC
  • Publisher URL: https://pymol.org/2/

PyMOL 2.5.0 Full Description

PyMOL is a user-sponsored molecular visualization system on an open-source foundation. Please support development of this open, effective, and affordable software by purchasing an incentive copy, which is pre-built and comes with maintenance and support.

PyMOL can interpret over 30 different file formats from PDB files to multi-SDF files to volumetric electron density maps. PyMOL's straightforward graphical user interface allows first-time and expert users alike to create stunning 3-D images from their favorite file formats. Images and movies can then be saved in a cross-platform Session file, ensuring that every object position, atom color, molecule representation, molecular state, frame, and movie can be viewed by colleagues exactly as intended.

Using PyMOL, data can be represented in nearly 20 different ways. Spheres provides a CPK-like view, surface and mesh provide more volumetric views, lines and sticks put the emphasis on bond connectivity, and ribbon and cartoon are popular representations for identifying secondary structure and topology. PyMOL's quick demo, accessible through the built-in Wizard menu, gets users started with all of the standard representations.

Features:

VIEW 3D Molecular Structures
RENDER Figures Artistically
ANIMATE Molecules Dynamically
EXPORT PyMOL Geometry
PRESENT 3D Data with AxPyMOL
DEVELOP with JyMOL

Release notes:

New Release
Exclusive Incentive PyMOL Features:
Multi-level undo/redo for all PyMOL actions
MAE import: more ribbon styles and label improvements
MAE import dialog: discrete states support
Builder: Nucleotides from the PDB can now be extended
APBS plugin: PDB2PQR 3 compatibility
STL export: average normals when exporting
`sphere_mode` s 10/11 scaled
Builder: “Remove Residue” button added
Load collada as CGO
File Import/Export:
DX binary map import support (*dxbin)
PDB/MMTF export: symmetry information now added
Improved FASTA import
Support for map.gz and mrc.gz extensions
Builder & Panels:
Builder: Improved fuse command (disallows hypervalent bonds, substitute monovalent atoms instead of attaching to them)
Panel: Customizable Keyboard Shortcut Menu
Panel: Properties inspector now supports unsetting settings with “Delete” key
Graphics & Visualization:
Ray interior colors now match primitives with `set ray_interior_color, atomic` 120
Isomesh transparency support
[ PyMOL full changelog ]
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