PyMOL 3.1.5.1

PyMOL, developed by DeLano Scientific LLC, stands as a premier molecular visualization system that has garnered widespread acclaim in the scientific community for its robust capabilities and user-friendly interface. This software is meticulously designed to cater to the needs of researchers, educators, and students in the fields of chemistry, biochemistry, and structural biology.

At its core, PyMOL excels in rendering high-quality 3D images of molecular structures, allowing users to visualize complex biomolecules with remarkable clarity. Its powerful rendering engine supports a variety of molecular representations, including sticks, spheres, surfaces, and cartoons, which can be customized to highlight specific features of interest. This flexibility makes PyMOL an indispensable tool for elucidating the intricate details of protein-ligand interactions, nucleic acid structures, and other macromolecular assemblies.

One of PyMOL's standout features is its scripting capability, which enables users to automate repetitive tasks and create sophisticated visualizations with ease. The software supports Python scripting, providing a versatile platform for advanced users to extend its functionality and integrate it with other computational tools. This extensibility is further enhanced by a vibrant community of users who contribute plugins and scripts, fostering a collaborative environment for continuous improvement and innovation.

In addition to its visualization prowess, PyMOL offers a suite of analytical tools that facilitate in-depth exploration of molecular properties. Users can calculate distances, angles, and dihedrals, as well as perform molecular dynamics simulations and energy minimizations. These features are complemented by an intuitive graphical user interface that simplifies the process of manipulating and analyzing molecular structures, making it accessible to both novice and experienced users.

PyMOL's versatility extends beyond static images, as it also supports the creation of high-quality animations. These animations can be used to illustrate dynamic processes such as conformational changes, molecular docking, and protein folding, providing a dynamic and engaging way to present scientific findings.

Educational institutions and research organizations alike benefit from PyMOL's comprehensive documentation and extensive online resources. Tutorials, user guides, and community forums offer valuable support, ensuring that users can quickly become proficient in leveraging the software's full potential.

In summary, PyMOL by DeLano Scientific LLC is a powerful and versatile molecular visualization tool that combines high-quality rendering, extensive analytical capabilities, and a user-friendly interface. Its adaptability through scripting and community-driven enhancements make it an essential asset for anyone involved in molecular research and education. Whether you are visualizing complex molecular structures, conducting detailed analyses, or creating captivating animations, PyMOL stands out as a reliable and indispensable tool in the realm of molecular visualization.

Release notes:

New Release
Fixed issue where files could not be opened from MacOS finder.
`.sdfgz` now importable (`.sdf.gz` was already importable)
Fixed issue where non-ASCII characters in `.cms` files could not be read
[ PyMOL full changelog ]